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84 changes: 84 additions & 0 deletions data/mge-cluster/mge-cluster.biotools.json
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{
"additionDate": "2026-10-09T09:32:11.288860Z",
"biotoolsCURIE": "biotools:mge-cluster",
"biotoolsID": "mge-cluster",
"description": "A reference-free classification framework for clustering and typing mobile genetic elements using unitig presence/absence profiles, openTSNE dimensionality reduction, and HDBSCAN clustering.",
"documentation": [
{
"type": [
"General"
],
"url": "https://gitlab.com/sirarredondo/mge-cluster"
}
],
"editPermission": {
"type": "private"
},
"function": [
{
"input": [
{
"data": {
"term": "Sequence",
"uri": "http://edamontology.org/data_2044"
},
"format": [
{
"term": "FASTA",
"uri": "http://edamontology.org/format_1929"
}
]
}
],
"operation": [
{
"term": "Sequence clustering",
"uri": "http://edamontology.org/operation_0291"
}
],
"output": [
{
"data": {
"term": "Sequence cluster",
"uri": "http://edamontology.org/data_1235"
}
}
]
}
],
"homepage": "https://gitlab.com/sirarredondo/mge-cluster",
"lastUpdate": "2026-10-09T09:32:11.292994Z",
"license": "MIT",
"link": [
{
"type": [
"Issue tracker"
],
"url": "https://gitlab.com/sirarredondo/mge-cluster/-/issues"
},
{
"type": [
"Repository"
],
"url": "https://gitlab.com/sirarredondo/mge-cluster"
}
],
"name": "mge-cluster",
"owner": "CWestergaard",
"publication": [
{
"doi": "10.1093/nargab/lqad066",
"pmcid": "PMC10331934",
"pmid": "37435357",
"type": [
"Primary"
]
}
],
"toolType": [
"Command-line tool"
],
"version": [
"1.1.0"
]
}