scverse / muon Star 270 Code Issues Pull requests Discussions muon is a multimodal omics Python framework muon scrna-seq multi-omics multimodal-data cite-seq scanpy scatac-seq anndata multimodal-omics-analysis mudata scverse Updated May 8, 2026 Python
scverse / mudata Star 122 Code Issues Pull requests Multimodal Data (.h5mu) implementation for Python genomics muon data-analysis multi-omics anndata multimodal-omics-analysis mudata scverse Updated Jun 8, 2026 Python
bioFAM / mofaflex Star 43 Code Issues Pull requests Discussions factor models for omics data bioinformatics single-cell factor-analysis multi-omics muvi mofa multimodal-omics-analysis Updated Jun 11, 2026 Python