Issues

• QC section

  sgkit-dev/sgkit-publication#89 · Filter by author hammer opened on Jan 9, 2024
  1

• Complete first draft of "distributed compute" section

  sgkit-dev/sgkit-publication#88 · Filter by author jeromekelleher opened on Jan 9, 2024

• Statistical genetics section

  sgkit-dev/sgkit-publication#78 · Filter by author hammer opened on Jan 3, 2024
  23

• Add some memory benchmarks

  sgkit-dev/sgkit-publication#74 · Filter by author jeromekelleher opened on Dec 21, 2023

• Add TileDB to comparisons?

  related work
  sgkit-dev/sgkit-publication#70 · Filter by author timothymillar opened on Dec 18, 2023
  1

• Add slicing support to savvy-afdist for fig 3

  sgkit-dev/sgkit-publication#67 · Filter by author jeromekelleher opened on Dec 15, 2023
  

• Add interesting sample-subsetting in Fig 3

  sgkit-dev/sgkit-publication#66 · Filter by author jeromekelleher opened on Dec 15, 2023
  1

• Discuss "compressive genomics"

  sgkit-dev/sgkit-publication#52 · Filter by author jeromekelleher opened on Dec 7, 2023
  2

• Optimise chunk sizes for both perf and storage scaling plots

  sgkit-dev/sgkit-publication#47 · Filter by author benjeffery opened on Dec 5, 2023
  2

• Use HAPNEST data for gwas demo?

  sgkit-dev/sgkit-publication#43 · Filter by author jeromekelleher opened on Nov 23, 2023
  8

• Benchmark relationship matrices

  sgkit-dev/sgkit-publication#42 · Filter by author timothymillar opened on Nov 20, 2023
  7

• Scaling-out comparison with Hail

  related work
  sgkit-dev/sgkit-publication#39 · Filter by author jeromekelleher opened on Sep 18, 2023

• Overview of stat-gen issues/methods in autopolyploids

  sgkit-dev/sgkit-publication#30 · Filter by author timothymillar opened on Aug 8, 2023

• Quantgen software review

  sgkit-dev/sgkit-publication#26 · Filter by author jeromekelleher opened on Aug 4, 2023
  2

• Mine discussions forum for text

  sgkit-dev/sgkit-publication#25 · Filter by author jeromekelleher opened on Jul 17, 2023
  

• Quantgen use-case

  sgkit-dev/sgkit-publication#9 · Filter by author jeromekelleher opened on Dec 2, 2022
  6

• Popgen use-case

  sgkit-dev/sgkit-publication#8 · Filter by author jeromekelleher opened on Dec 2, 2022
  1

• Use cases

  sgkit-dev/sgkit-publication#6 · Filter by author hammer opened on Nov 21, 2022
  3

• Citation justifying use of numba

  sgkit-dev/sgkit-publication#4 · Filter by author jeromekelleher opened on Jun 21, 2021
  2