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WGD forward pass: prioritize branches by leaf count - #3

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wgd-leaf-priority
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wgd-leaf-priority

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Replaces highest-ΔAIC selection with a leaf-count-first strategy: the candidate subtending the most leaves is preferred (more parsimonious explanation of correlated high counts), with ΔAIC as a tiebreaker. Also adds getLeafCount() and beats() helpers, and unifies q/t optimization into optimizeParam().

Replaces highest-ΔAIC selection with a leaf-count-first strategy:
the candidate subtending the most leaves is preferred (more
parsimonious explanation of correlated high counts), with ΔAIC
as a tiebreaker. Also adds getLeafCount() and beats() helpers,
and unifies q/t optimization into optimizeParam().

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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