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St. Jude Cloud
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30 packages
util
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
279k
samtools
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
111k
ngsderive
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
103k
picard
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
85.8k
bwa
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
81.7k
qualimap
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
37.8k
fastqc
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
37.8k
fastq_screen
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
36.5k
fqlib
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
29.8k
multiqc
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
24.2k
sequencerr
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
23.1k
star
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
16.3k
conda-base
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
15.8k
estimate
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
13.6k
expression-classification
Published
Nov 20, 2021
by
St. Jude Cloud
in
stjudecloud/expression-classification
11.6k
mosdepth
Published
Jan 23, 2023
by
St. Jude Cloud
in
stjudecloud/workflows
9.41k
actions-runner
Published
May 16, 2024
by
St. Jude Cloud
8.05k
deeptools
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
7.99k
htseq
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
7.26k
gtfparse
Published
Oct 25, 2021
by
St. Jude Cloud
in
stjudecloud/workflows
7.02k
kraken2
Published
Mar 25, 2023
by
St. Jude Cloud
in
stjudecloud/workflows
6.03k
minfi
Published
Nov 8, 2024
by
St. Jude Cloud
in
stjudecloud/workflows
5.45k
pandas
Published
Dec 16, 2024
by
St. Jude Cloud
in
stjudecloud/workflows
4.05k
umap
Published
Nov 8, 2024
by
St. Jude Cloud
in
stjudecloud/workflows
3.71k
python-plotting
Published
Nov 8, 2024
by
St. Jude Cloud
in
stjudecloud/workflows
3.68k
minimap2
Published
Dec 3, 2025
by
St. Jude Cloud
in
stjudecloud/workflows
1.49k
stellar
Published
Nov 14, 2025
by
St. Jude Cloud
1.22k
atlantis
Published
Jun 6, 2024
by
St. Jude Cloud
1.09k
bwamem2
Published
Dec 3, 2025
by
St. Jude Cloud
in
stjudecloud/workflows
432
juicertools
Published
Aug 28, 2024
by
St. Jude Cloud
in
stjudecloud/workflows
396
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