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58 changes: 23 additions & 35 deletions docs/_toc.yml
Original file line number Diff line number Diff line change
Expand Up @@ -5,51 +5,39 @@ subtrees:
subtrees:
- titlesonly: True
entries:
- file: tutorials/start_index
- file: getting_started/quick_start
- file: getting_started/start_index
subtrees:
- titlesonly: True
entries:
- file: tutorials/fundamentals/quick_start
- file: tutorials/fundamentals/installation
- file: tutorials/fundamentals/installation_bundle_conda
- file: tutorials/fundamentals/getting_started
- file: tutorials/fundamentals/viewer
- file: tutorials/fundamentals/features
- file: guides/layers
- file: getting_started/installation
- file: getting_started/launch_napari
- file: getting_started/open_images
- file: getting_started/viewer
- file: getting_started/layers
- file: getting_started/features
- file: howtos/layers/index
subtrees:
- titlesonly: True
entries:
- file: howtos/layers/image
- file: howtos/layers/labels
- file: howtos/layers/shapes
- file: howtos/layers/points
- file: howtos/layers/tracks
- file: howtos/layers/vectors
- file: howtos/layers/surface
- file: tutorials/index
subtrees:
- entries:
- file: tutorials/annotation/index
subtrees:
- entries:
- file: tutorials/annotation/annotate_points
- file: tutorials/processing/index
subtrees:
- entries:
- file: tutorials/processing/dask
- file: tutorials/segmentation/index
subtrees:
- entries:
- file: tutorials/segmentation/annotate_segmentation
- file: tutorials/tracking/index
subtrees:
- entries:
- file: tutorials/tracking/cell_tracking
- file: tutorials/annotate_points
- file: tutorials/dask
- file: tutorials/annotate_segmentation
- file: tutorials/cell_tracking
- file: howtos/index
subtrees:
- titlesonly: True
entries:
- file: howtos/layers/index
subtrees:
- titlesonly: True
entries:
- file: howtos/layers/image
- file: howtos/layers/labels
- file: howtos/layers/points
- file: howtos/layers/shapes
- file: howtos/layers/surface
- file: howtos/layers/tracks
- file: howtos/layers/vectors
- file: howtos/extending/index
subtrees:
- titlesonly: True
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2 changes: 1 addition & 1 deletion docs/developers/contributing/documentation/index.md
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Expand Up @@ -513,7 +513,7 @@ You will need:
```bash
python -m pip install -e ".[pyqt]" --group docs
```
This will use the default Qt backend. For other options, see [the napari installation guide](../../../tutorials/fundamentals/installation.md#choosing-a-different-qt-backend).
This will use the default Qt backend. For other options, see [the napari installation guide](choosing-qt-backend).

````{note}
You can combine the documentation dependencies with [a development installation of napari](dev-installation) by selecting the Qt extra and both dependency groups, e.g. installing with `.[pyqt]` and adding `--group dev --group docs`.
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2 changes: 1 addition & 1 deletion docs/further-resources/napari-workshops.md
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@@ -1,6 +1,6 @@
(workshops)=

# napari workshops
# Workshops

There have been many workshops and tutorials given about napari.
This page contains a list, to make them easier to find online.
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Original file line number Diff line number Diff line change
Expand Up @@ -35,9 +35,9 @@ keys to make a selection. Once you have the action you want highlighted, press
```{raw} html
<figure>
<video width="100%" controls autoplay loop muted playsinline>
<source src="../../_static/images/command-palette.webm" type="video/webm" />
<source src="../../_static/images/command-palette.mp4" type="video/mp4" />
<img src="../../_static/images/command-palette.png"
<source src="../_static/images/command-palette.webm" type="video/webm" />
<source src="../_static/images/command-palette.mp4" type="video/mp4" />
<img src="../_static/images/command-palette.png"
title="Your browser does not support the video tag"
alt="a screen recording showing the command palette in action to open Cells 3D example and toggle 3D viewer mode"
>
Expand All @@ -56,7 +56,7 @@ When using a `Shapes` layer to annotate features of interest, the **Shape Measur

This tool can be enabled by clicking on `Layers->Measure->Toggle shape dimensions measurement (napari builltins)` while a `Shapes` layer is selected. As with all other commands, this can also be enabled using the [command palette](command-palette) by searching for "shape measurement".

![image: Shape measurement tool enabled](../../_static/images/shape-measure.png).
![image: Shape measurement tool enabled](../_static/images/shape-measure.png).

The measurements are displayed on the canvas and updated live, and they are also accessible through the layer's features table via `layer.features['_area']` and `layer.features['_perimeter']`.

Expand All @@ -66,7 +66,7 @@ The measurements are displayed on the canvas and updated live, and they are also

The **Features Table Widget** can be used to visualize, edit, select, or save the contents of the `features` table of any layer that supports features (e.g., `Points.features`).

![image: Features Table Widget](../../_static/images/features_table_widget.png).
![image: Features Table Widget](../_static/images/features_table_widget.png).

To open it, go to `Layer -> Visualize -> Features Table Widget` or press
{kbd}`Command/Ctrl+Shift+P` to open the [command palette](command-palette) and search for "features".
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