Search results

Original dataset Basset is trained on

Status: Open.

#57 In davek44/Basset;

· SBNoor opened on Dec 13, 2022

Used in non human species

Status: Open.

#56 In davek44/Basset;

· guandailu opened on Aug 3, 2021

bedtools getfasta skipping problem

Status: Open.

#55 In davek44/Basset;

· mharoun20 opened on Jul 29, 2021

preprocess_features.py file is generating empty output bed files

Status: Open.

#54 In davek44/Basset;

· ranijames opened on Aug 13, 2020

ENUM error when running basset_train.lua

Status: Open.

#53 In davek44/Basset;

· doczmp opened on Jul 28, 2020

how to install 'convnet' module

Status: Open.

#52 In davek44/Basset;

· song984888 opened on Jun 9, 2020

Docker image Lua and Python setups wrong

Status: Open.

#51 In davek44/Basset;

· ptn24 opened on Apr 30, 2020

install_data.py requires more than 30 GiB of memory

Status: Open.

#50 In davek44/Basset;

· ptn24 opened on Apr 30, 2020

input and target size mismatch when running test.lua

Status: Open.

#46 In davek44/Basset;

· MaYB2333 opened on May 16, 2019

Error in running basset_sat_vcf.py

Status: Open.

#44 In davek44/Basset;

· huruifeng opened on Jan 24, 2019

Motif presence at genomic location

Status: Open.

#28 In davek44/Basset;

· dborgesr opened on Dec 2, 2016

Not python 3 friendly

Status: Open.

#15 In davek44/Basset;

· lzamparo opened on Jan 27, 2016