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SteadyCom doesn't works with Gurobi

Status: Open.

#35 In cdanielmachado/reframed;

· ggmirandac opened on Nov 21, 2025

Adding exchange reaction ... with default bounds for boundary metabolite: ... & Ignoring reaction ... since it already exists.

Status: Open.

#33 In cdanielmachado/reframed;

· Patrickens opened on Jul 30, 2025

Function compare_fluxes does not return any result

Status: Open.

#32 In cdanielmachado/reframed;

· eccmorais opened on Jul 8, 2025

Understanding SteadyCom/SteadierCom

Status: Open.

#31 In cdanielmachado/reframed;

· ryan-boobybiome opened on May 1, 2025

Use set() instead of [] for var_ids in Solver

Status: Open.

#28 In cdanielmachado/reframed;

· Prunoideae opened on Jul 14, 2024

itle: Difficulty Performing SteadyCom Analysis on Genome-Scale Community Model Created with CarveMe

Status: Open.

#27 In cdanielmachado/reframed;

· wtscott31 opened on May 29, 2024

Transcriptomics usage

Status: Open.

#26 In cdanielmachado/reframed;

· FelipeMelis opened on Feb 15, 2024

Adding reactions

Status: Open.

#24 In cdanielmachado/reframed;

· amarsh26 opened on Dec 21, 2023

Annotations not properly parsed

Status: Open.

#21 In cdanielmachado/reframed;

· sulheim opened on Oct 9, 2023

Question about loading models

Status: Open.

#20 In cdanielmachado/reframed;

· amarsh26 opened on Jul 25, 2023

set_gpr_association does not remove genes

Status: Open.

#18 In cdanielmachado/reframed;

· IdunBurgos opened on Apr 26, 2023

Infeasible or Unbounded in reframed while solvable by cobrapy

Status: Open.

#13 In cdanielmachado/reframed;

· ccshao opened on May 12, 2022