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Common/auto log report
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Fix telemetry bugs and add chunk_and_submit_genpipes wrapper
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Fix --no-json container run flag error issue
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fix name of expected output file from gembs call to avoid restarts
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Fix collapse_annotation.py KeyError on UCSC GTFs missing transcript_type
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change function used for md5sum to avoid wrong output file path in json
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testing fix for missing slash in path
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Md5sum calculation for project tracking (--json-pt)
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Format2pcgr
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add entry to exome ini to run verifybamid for WES
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add ini section to merge clairS jobs
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