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Files produced are empty post dehosting

Status: Open.

#69 In bede/hostile;

· Rohit-Satyam opened on Jan 31, 2026

Request: retain tags

Status: Open.

#65 In bede/hostile;

· funnell opened on Jul 22, 2025

Can Hostile Output Full FASTQ Headers for Medaka Compatibility?

enhancementNew feature or requestNew feature or request

Status: Open.

#63 In bede/hostile;

· xiaoli-dong opened on Jul 9, 2025

Nicely handle corrupt Minimap2 indexes, build at fetch time?

enhancementNew feature or requestNew feature or request

Status: Open.

#59 In bede/hostile;

· bede opened on Mar 26, 2025

Metatranscriptome performance

Status: Open.

#56 In bede/hostile;

· sterrettJD opened on Feb 27, 2025

(Optionally) show read counts to individual host sequences

enhancementNew feature or requestNew feature or request

Status: Open.

#54 In bede/hostile;

· rzelle-lallemand opened on Feb 10, 2025

Selection of appropriate reference genomes (indexes)

enhancementNew feature or requestNew feature or request

Status: Open.

#36 In bede/hostile;

· DrYoungOG opened on May 12, 2024