Genbank parser rewrite#437

Draft

carreter wants to merge 22 commits into

carreter:genbank-rewrite

Commits on Jan 11, 2024

Beginning of rewrite. Can parse header and LOCUS.
carreter
committed

Commits on Jan 15, 2024

Commit the rest of the code and make some fixes per twflem's suggestions
carreter
committed

Commits on Jan 16, 2024

Factor magic numbers into named variables and make tests round trip
carreter
committed

Commits on Jun 6, 2025

Fixing updateweights example (#435)

cachemoi
authored and
carreter
committed
added some more test coverage to fold subpackage. (#436)

TimothyStiles
authored and
carreter
committed
#360 Bwt (#411)

committed
moved align, bwt, and mash into new search package. (#438)

TimothyStiles
authored and
carreter
committed
Update CHANGELOG.md (#439)

TimothyStiles
authored and
carreter
committed
Run length bwt (#440)

authored and
carreter
committed
updated CHANGELOG.

TimothyStiles
authored and
carreter
committed
added package level doc strings. (#441)

TimothyStiles
authored and
carreter
committed
Update CHANGELOG.md

TimothyStiles
authored and
carreter
committed
Update CHANGELOG.md

TimothyStiles
authored and
carreter
committed
Update README.md

TimothyStiles
authored and
carreter
committed
Update README.md (#444)

TimothyStiles
authored and
carreter
committed
Update copyright year

TimothyStiles
authored and
carreter
committed
lint fix. (#445)

TimothyStiles
authored and
carreter
committed
Tutorial refactor (#443)

TimothyStiles
authored and
carreter
committed
updated devcontainer image. (#446)

TimothyStiles
authored and
carreter
committed
Separated minimums between design and simulate (#447)

whitead
authored and
carreter
committed
Dirty commit to save progress
carreter
committed

Commits on Jul 5, 2025

Dirty commit to switch computers
carreter
committed