Issues

• popgen functionality needs tests for missing data

  enhancement
  aprilweilab/grapp#72 · Filter by author dcdehaas opened on Aug 27, 2026

• Some commands ignore file extension

  enhancement
  aprilweilab/grapp#65 · Filter by author dcdehaas opened on Jul 14, 2026

• GRGCalculator: Use scheduler for all operations

  aprilweilab/grapp#54 · Filter by author YfLi03 opened on Apr 8, 2026

• export: support missing genotypes

  enhancement
  aprilweilab/grapp#51 · Filter by author dcdehaas opened on Mar 26, 2026

• export: support exporting unphased data

  enhancement
  aprilweilab/grapp#50 · Filter by author dcdehaas opened on Mar 26, 2026

• Test coverage: add test that coal counts are valid on downsample

  enhancement
  aprilweilab/grapp#33 · Filter by author dcdehaas opened on Feb 16, 2026

• Add "grapp filter --gwas"

  enhancement
  aprilweilab/grapp#11 · Filter by author dcdehaas opened on Nov 17, 2025