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doc: remove GEMs info from README #30

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12 changes: 1 addition & 11 deletions README.md
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Expand Up @@ -30,21 +30,11 @@ In addition, significant DE hits for all organisms and conditions are mapped to

Finally, an integrated table that contains results from DE RNAseq analysis, absolute proteomics levels, GO terms, gene names, molecular weights, AA sequence length, etc. is generated for the three organisms.

## Integration into GEMs
The absolute proteomics datasets [NSAF] have also been incorporated to enzyme-constrained GEMs for the three organisms, available at:

| Organism | Model ID | URL |
| ------------- |:-------------:|:-------------:|
| *S. cervisiae* | ecYeastGEM | https://github.com/SysBioChalmers/ecModels/tree/chore/updateYeastGEM |
| *K. marxianus* | ecKmarxGEM | https://github.com/SysBioChalmers/ecModels/tree/chore/updateKmarx |
| *Y. lipolytica* | ecYaliGEM | https://github.com/SysBioChalmers/ecModels/tree/chore/update_iYali |


## KeyWords

**Repo Category:** Data Analysis; **Utilisation:** Multi-omics/multi-organisms datasets analysis; **Field:** Stress adaptation studies, Metabolic engineering, Omics, Evolutionary conservation;**Omic Source:** Transcriptomics, Proteomics, Genome-wide orthology; **Taxonomy:** *S. cervisiae* CEN.PK 113 /-D, *K. marxianus* CBS6556, *Y. lipolytica* W29

Last update: 2019-06-16
Last update: 2020-03-31


This repository is administered by [@IVANDOMENZAIN](https://github.com/IVANDOMENZAIN), Division of Systems and Synthetic Biology, Department of Biology and Biological Engineering, Chalmers University of Technology
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