Skip to content

docs: update citation for Human2 in README.md#1024

Merged
edkerk merged 2 commits into
developfrom
docs/update-citation
Jul 10, 2026
Merged

docs: update citation for Human2 in README.md#1024
edkerk merged 2 commits into
developfrom
docs/update-citation

Conversation

@mihai-sysbio

Copy link
Copy Markdown
Member

Main improvements in this PR:

This is just adding the DOI in the Readme.

I hereby confirm that I have:

  • Any removed reactions and metabolites have been moved to the corresponding deprecated identifier lists in data/deprecatedIdentifiers/.
  • This PR has develop as target branch, and will be resolved with a squash-merge.

@github-actions

github-actions Bot commented Jun 26, 2026

Copy link
Copy Markdown

This PR has been automatically tested with GH Actions. Here is the output of the MACAW test:

Starting dead-end test...
- Found 1384 dead-end metabolites.
- Found 1141 reactions incapable of sustaining steady-state fluxes in either direction due to these dead-ends.
- Found 1369 reversible reactions that can only carry steady-state fluxes in a single direction due to dead-ends.
Starting duplicate test...
- Skipping redox duplicates because no redox_pairs and/or proton_ids were provided.
- Found 377 reactions that were some type of duplicate:
- 0 were completely identical to at least one other reaction.
- 13 involve the same metabolites but go in the opposite direction or have the opposite reversibility as at least one other reaction.
- 377 involve the same metabolites but with different coefficients as at least one other reaction.

This and a more detailed output from MACAW are also committed to data/macawResults/.

Note: In the case of multiple test runs, this post will be edited.

@edkerk edkerk merged commit f870cbb into develop Jul 10, 2026
1 of 2 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants