Adapt vis_clus() functions for use with Xenium data

DESCRIPTION

@@ -1,8 +1,8 @@
 Package: spatialLIBD
 Title: spatialLIBD: an R/Bioconductor package to visualize spatially-resolved
     transcriptomics data
-Version: 1.23.2
-Date: 2026-01-09
+Version: 1.25.1
+Date: 2026-05-20
 Authors@R:
     c(
     person("Leonardo", "Collado-Torres", role = c("aut", "cre"), 

NAMESPACE

@@ -40,8 +40,10 @@ export(sig_genes_extract)
 export(sig_genes_extract_all)
 export(sort_clusters)
 export(vis_clus)
+export(vis_clus_c)
 export(vis_clus_p)
 export(vis_gene)
+export(vis_gene_c)
 export(vis_gene_p)
 export(vis_grid_clus)
 export(vis_grid_gene)

NEWS.md

@@ -1,3 +1,17 @@
+# spatialLIBD 1.25.1
+
+NEW FEATURES
+
+* `fetch_data()` now has example Xenium data you can access
+with `type = "spe_xenium_example"`.
+* `vis_gene()`, `vis_gene_grid()`, `vis_clus()`, `vis_clus_grid()`
+all now support Xenium data. This is partially done through the
+new internal functions `vis_gene_c()` and `vis_clus_c()`.
+* `run_app()` now supports Xenium data. So `shiny`-powered
+apps can now be built for Xenium (10x Genomics) data.
+* These features were added by @lahuuki and @lcolladotor
+as part of <https://github.com/LieberInstitute/spatialLIBD/pull/121>.
+
 # spatialLIBD 1.23.2
 
 NEW FEATURES