Issues

• Computing distances twice for random landmarking

  enhancement
  KrishnaswamyLab/graphtools#78 · Filter by author MattScicluna opened on Sep 4, 2025

• Please depend on igraph instead of python-igraph

  KrishnaswamyLab/graphtools#68 · Filter by author szhorvat opened on Oct 13, 2023

• Support for unweighted kNN graphs

  KrishnaswamyLab/graphtools#67 · Filter by author stanleyjs opened on Feb 16, 2023

• Using MNN corrected values in PHATE and other dimensionality reduction techniques.

  KrishnaswamyLab/graphtools#63 · Filter by author jluthy opened on Sep 24, 2022

• test_exact.test_shortest_path_affinity fails

  KrishnaswamyLab/graphtools#61 · Filter by author stanleyjs opened on Jan 3, 2022

• Landmark graph size does not match n_landmark

  KrishnaswamyLab/graphtools#60 · Filter by author stanleyjs opened on Jan 3, 2022

• Inaccuracy in randomized SVD at moderate ranks

  KrishnaswamyLab/graphtools#58 · Filter by author stanleyjs opened on Nov 17, 2021
  7

• MNNGraph parameters

  KrishnaswamyLab/graphtools#56 · Filter by author dburkhardt opened on Mar 5, 2021
  

• graphtools.data

  enhancement
  KrishnaswamyLab/graphtools#51 · Filter by author scottgigante opened on Feb 24, 2020
  

• k should scale with dataset size

  enhancementquestion
  KrishnaswamyLab/graphtools#42 · Filter by author dburkhardt opened on Aug 5, 2019
  1

  

• Add batch neighbor counting helper

  enhancementgood first issuehelp wanted
  KrishnaswamyLab/graphtools#38 · Filter by author dburkhardt opened on Mar 21, 2019
  

• PyGSP

  KrishnaswamyLab/graphtools#37 · Filter by author mdeff opened on Mar 14, 2019
  1

• Refactor kernel tools

  enhancement
  KrishnaswamyLab/graphtools#33 · Filter by author stanleyjs opened on Feb 6, 2019