This repository was archived by the owner on Mar 12, 2026. It is now read-only.
This repository was archived by the owner on Mar 12, 2026. It is now read-only.
Implementation of the transmission disequilibrium test (TDT) analysis #19
Oskar should offer family-based association analysis running on Spark framework and taking Parquet files as input. The most-used family-based association analysis is the transmission disequilibrium test (TDT) given case/control phenotypes and pedigree information.
The Spark TDT implementation will follow the Oskar Analysis and AnalysisExecutor schema and rely on the TDT transformer already implemented in Oskar.