gsDesign/_pkgdown.yml at master · keaven/gsDesign · GitHub

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url: https://keaven.github.io/gsDesign/

template:
  bootstrap: 5
  bslib:
    preset: "bootstrap"
  math-rendering: "mathjax"

reference:
- title: Group Sequential Computation
  desc: >
    For an overview of the gsDesign package, see
    `vignette("gsDesignPackageOverview")`.
  contents:
  - gsDesign
  - plot.gsDesign
  - gsProbability
  - gsBound1
  - gsBound
  - sequentialPValue
- title: Design Characterization
  contents:
  - gsBoundSummary
  - print.gsBoundSummary
  - gsDelta
  - xtable
  - xprint
- title: Normal Endpoint Design
  contents:
  - nNormal
- title: Binomial Endpoint Design
  contents:
  - nBinomial
  - gsRR
  - simBinomial
  - testBinomial
  - varBinomial
  - ciBinomial
  - binomialPowerTable
- title: Time-to-Event Endpoint Design
  desc: >
    Early, independent and more limited implementation of Lachin and Foulkes
    methods are in `nSurvival()` and `print.nSurvival()`.
  contents:
  - gsSurv
  - print.gsSurv
  - gsSurvCalendar
  - gsSurvPower
  - nSurv
  - nEvents
  - gsHR
  - zn2hr
  - hrn2z
  - hrz2n
  - eEvents
  - nEventsIA
  - tEventsIA
  - toInteger
  - nSurvival
  - print.nSurvival
- title: Vaccine/Prevention Efficacy
  contents:
  - toBinomialExact
- title: Spending Functions
  desc: >
    For an overview of spending functions, see
    `vignette("SpendingFunctionOverview")`.
  contents:
  - spendingFunction
  - summary.spendfn
  - sfLDPocock
  - sfLDOF
  - sfHSD
  - sfPower
  - sfExponential
  - sfNormal
  - sfCauchy
  - sfTDist
  - sfLogistic
  - sfBetaDist
  - sfExtremeValue
  - sfExtremeValue2
  - sfLinear
  - sfStep
  - sfPoints
  - sfTrimmed
  - sfTruncated
  - sfGapped
  - sfXG1
  - sfXG2
  - sfXG3
- title: Conditional and Predictive Power
  contents:
  - gsCP
  - gsCPz
  - gsBoundCP
  - gsBValue
  - normalGrid
  - gsDensity
  - gsPosterior
  - gsPOS
  - gsPP
  - gsCPOS
  - gsPI
- title: Sample Size Adaptation
  contents:
  - ssrCP
  - condPower
  - Power.ssrCP
  - z2Fisher
  - z2Z
  - z2NC
- title: Single Arm Binomial Design
  contents:
  - gsBinomialExact
  - plot.gsBinomialExact
  - binomialSPRT
  - plot.binomialSPRT
  - nBinomial1Sample
- title: Input Checking
  contents:
  - isInteger
  - checkLengths
  - checkRange
  - checkScalar
  - checkVector
- title: Summary tables
  contents:
  - as_table
  - as_table.gsBinomialExact
  - as_gt
  - as_gt.gsBinomialExactTable
  - as_rtf
  - as_rtf.gsBinomialExactTable

articles:
  - title: "Designing for time-to-event endpoints"
    desc: >
      These vignettes provide an introduction to designing group sequential trials with
      time-to-event endpoints using gsDesign.
    contents:
      - SurvivalOverview
      - toInteger
      - gsSurvBasicExamples
      - gsSurvPower
      - HarmBound
      - SelectiveBoundTesting
      - PoissonMixtureModel
  - title: "Other"
    desc: >
        Other vignettes.
    contents:
      - GentleIntroductionToGSD
      - gsDesignPackageOverview
      - SpendingFunctionOverview
      - ConditionalPowerPlot
      - ConditionalErrorSpending
      - nNormal
      - hGraph
      - GraphicalMultiplicity
      - VaccineEfficacy
      - binomialTwoSample
      - binomialSPRTExample