abfwrite

[dervinism]

Is there an abfwrite equivalent for matlab?

[fcollman]

not that i'm aware of... when i wrote stimulus files I used a text format to import into pclamp.

[swharden]

For what it's worth it may be pretty simple to implement an ABF file writer.

pyABF does this by writing ABF1 files - they have an extremely simple header and are easily loaded by clampex/clampfit and older analysis software like MiniAnalysis

https://github.com/swharden/pyABF/blob/master/src/pyabf/abfWriter.py

[dervinism]

Ok, thanks for the link. Will try to make a matlab version at some point.

[dervinism]

Hi. Just had some time write a code for saving version 1.3 ABF files both in Python and Matlab. These functions save data matrix rows as separate channels rather than sweeps.
https://github.com/dervinism/abfUtilities

[fcollman]

awesome! we'll leave this issue open so that others can find your code.