Issues

• Have JBrowse data files behind Apollo password

  GMOD/Apollo3#830 · Filter by author garrettjstevens opened on Aug 19, 2026

• CRAM alignment tracks time out with WebWorkerRpcDriver but work with MainThreadRpcDriver in Apollo 3

  bug
  GMOD/Apollo3#820 · Filter by author darcyabjones opened on Jul 23, 2026

• Google OAuth API service requires HTTPS

  GMOD/Apollo3#797 · Filter by author darcyabjones opened on May 29, 2026
  4

• Show start/stop codons in transcript widget

  GMOD/Apollo3#786 · Filter by author garrettjstevens opened on Apr 30, 2026
  2

• Authentication with Microsoft

  GMOD/Apollo3#791 · Filter by author srobb1 opened on Apr 30, 2026
  1

• Show labels on glyphs

  GMOD/Apollo3#776 · Filter by author garrettjstevens opened on Mar 30, 2026
  2

• Merge gene option

  GMOD/Apollo3#775 · Filter by author garrettjstevens opened on Mar 30, 2026
  1

• Broadcast changes done by root user through API

  GMOD/Apollo3#774 · Filter by author shashankbrgowda opened on Mar 30, 2026
  1

• Navigating between two genomes using synteny links

  bug
  GMOD/Apollo3#746 · Filter by author mberriman opened on Dec 12, 2025

• Support displaying pseudogenic_CDS like a coding sequence

  GMOD/Apollo3#732 · Filter by author garrettjstevens opened on Nov 7, 2025
  1

• Apollo Track draws outside its boundaries when showing multiple regions

  bug
  GMOD/Apollo3#721 · Filter by author garrettjstevens opened on Oct 23, 2025
  2

• Support GenBank GFF3s with multiple gene lines

  GMOD/Apollo3#716 · Filter by author garrettjstevens opened on Oct 14, 2025

• Transcript details widget can be blank

  bug
  GMOD/Apollo3#710 · Filter by author garrettjstevens opened on Oct 8, 2025
  

• Needs investigation: slow and reverting changes

  GMOD/Apollo3#709 · Filter by author garrettjstevens opened on Oct 8, 2025

• edit reference sequence?

  bug
  GMOD/Apollo3#702 · Filter by author alpapan opened on Oct 3, 2025
  7

• LASFD: Alternative colours for different gene feature types

  GMOD/Apollo3#694 · Filter by author haessar opened on Sep 24, 2025

• Add customization docs

  GMOD/Apollo3#684 · Filter by author garrettjstevens opened on Sep 18, 2025

• Index file for bam/cram is not auto-detected

  bug
  GMOD/Apollo3#683 · Filter by author dariober opened on Sep 18, 2025

• ApolloSequenceAdapter getFeatures can be slow

  bug
  GMOD/Apollo3#673 · Filter by author garrettjstevens opened on Sep 2, 2025

• Havana requests

  GMOD/Apollo3#650 · Filter by author shashankbrgowda opened on Jul 30, 2025
  5

• Extending a CDS beyond the mRNA boundary extends the mRNA but not the exon

  bug
  GMOD/Apollo3#647 · Filter by author dariober opened on Jul 25, 2025

• Migration guide Apollo 2.X to Apollo3

  GMOD/Apollo3#626 · Filter by author carissableker opened on Jul 3, 2025

• Add a smoke test for docker images before pushing them to repository

  GMOD/Apollo3#621 · Filter by author amorison opened on Jun 30, 2025

• Unusual gene subfeatures remain invisible

  GMOD/Apollo3#615 · Filter by author dariober opened on Jun 24, 2025

• Manage users issues?

  bug
  GMOD/Apollo3#606 · Filter by author alpapan opened on Jun 3, 2025
  1