CellSeg3D/.github/workflows/test_and_deploy.yml at main · AdaptiveMotorControlLab/CellSeg3D · GitHub

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name: test and deploy

on:
  push:
    branches:
      - main
    tags:
      - "v*"
  pull_request:
    branches:
      - main
  workflow_dispatch:

jobs:
  test:
    name: ${{ matrix.platform }} py${{ matrix.python-version }}
    runs-on: ${{ matrix.platform }}

    strategy:
      fail-fast: false
      matrix:
        platform: [ubuntu-latest, windows-latest, macos-latest]
        python-version: ["3.10", "3.11", "3.12"]

    steps:
      - uses: actions/checkout@v6
        with:
          fetch-depth: 0

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v6
        with:
          python-version: ${{ matrix.python-version }}
          cache: pip

      - name: Install Qt libraries on Linux
        if: runner.os == 'Linux'
        uses: tlambert03/setup-qt-libs@v1

      - name: Install Windows OpenGL
        if: runner.os == 'Windows'
        shell: pwsh
        run: |
          git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git
          ./gl-ci-helpers/appveyor/install_opengl.ps1
          if (Test-Path -Path "C:\Windows\system32\opengl32.dll" -PathType Leaf) {
            exit 0
          } else {
            exit 1
          }

      - name: Install tox
        run: |
          python -m pip install --upgrade pip
          python -m pip install tox tox-gh-actions

      - name: Test with tox on Linux
        if: runner.os == 'Linux'
        uses: GabrielBB/xvfb-action@v1
        with:
          run: python -m tox
        env:
          PLATFORM: ${{ matrix.platform }}
          QT_API: pyqt6
          PYTEST_QT_API: pyqt6
          VISPY_USE_APP: pyqt6
          QT_OPENGL: software
          PYVISTA_OFF_SCREEN: true

      - name: Test with tox on Windows/macOS
        if: runner.os != 'Linux'
        run: python -m tox
        env:
          PLATFORM: ${{ matrix.platform }}
          QT_API: pyqt6
          PYTEST_QT_API: pyqt6
          VISPY_USE_APP: pyqt6
          QT_OPENGL: software
          PYVISTA_OFF_SCREEN: true

      - name: Upload coverage
        if: matrix.platform == 'ubuntu-latest' && matrix.python-version == '3.12'
        uses: codecov/codecov-action@v6
        with:
          files: ./coverage.xml
          fail_ci_if_error: false
        env:
          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

  deploy:
    needs: [test]
    runs-on: ubuntu-latest
    if: startsWith(github.ref, 'refs/tags/v')

    steps:
      - uses: actions/checkout@v6
        with:
            fetch-depth: 0

      - name: Set up Python
        uses: actions/setup-python@v6
        with:
          python-version: "3.12"

      - name: Install build tools
        run: |
          python -m pip install --upgrade pip
          python -m pip install build twine npe2

      - name: Validate plugin
        run: |
          python -m npe2 validate napari_cellseg3d/napari.yaml

      - name: Build package
        run: |
          python -m build

      - name: Check package
        run: |
          python -m twine check dist/*

      - name: Publish to PyPI
        env:
          TWINE_USERNAME: __token__
          TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }}
        run: |
          twine upload dist/*